10.6 Setup
In this lab, we’ll quantify evidence for introgression in human populations using \(D\) and related statistics.
10.6.1 R packages
In addition to tidyverse, we’ll use the admixr package, which allows us to easily run the software package ADMIXTOOLS from within R to calculate \(D\) and related statistics.
The exercises for class were adapted from the admixr tutorial, available here.